BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039D02LP1|AL430690
(932 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig238 1400 0.0
>3x_Contig238
Length = 1099
Score = 1400 bits (706), Expect = 0.0
Identities = 709/710 (99%)
Strand = Plus / Minus
Query: 1 actttgtagtactttctgttaaggattcctcatttattggacaccatgtagtgtattcag 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 actttgtagtactatctgttaaggattcctcatttattggacaccatgtagtgtattcag 795
Query: 61 taacaatgcctttagtggtagtcgttactgttgacaaataagcgctggttgtcttggttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 taacaatgcctttagtggtagtcgttactgttgacaaataagcgctggttgtcttggttg 735
Query: 121 tgacgcttccatgcgaatcagttgacgttataggaatgtgtgatgtaatacattcagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tgacgcttccatgcgaatcagttgacgttataggaatgtgtgatgtaatacattcagagc 675
Query: 181 atttctcggtaagagttgtggacagctgagattcagagcttgttgtttcagtggaggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 atttctcggtaagagttgtggacagctgagattcagagcttgttgtttcagtggaggaag 615
Query: 241 gcagttcagagttccctgaggttgttgaagaaactgaagatgcttgtgcagtatcagagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gcagttcagagttccctgaggttgttgaagaaactgaagatgcttgtgcagtatcagagg 555
Query: 301 aagtagtactagattgagaagtgatatcttcttcggtaattggacaccatgtagtgtaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aagtagtactagattgagaagtgatatcttcttcggtaattggacaccatgtagtgtaaa 495
Query: 361 tagttacaactccctttgttgttgttgtaaccgttgaaagtactgcgcttgtagttacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tagttacaactccctttgttgttgttgtaaccgttgaaagtactgcgcttgtagttacaa 435
Query: 421 ctgttgtgctaccttctgaatttgtacttgttaatgatatttctgatgtttcgcaagaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ctgttgtgctaccttctgaatttgtacttgttaatgatatttctgatgtttcgcaagaag 375
Query: 481 agcatacagatgtggtttttgtcgttttaggactttcctcctcatcgctagttgacacgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agcatacagatgtggtttttgtcgttttaggactttcctcctcatcgctagttgacacgg 315
Query: 541 aaaagagtgtcgaagaagttgaggtggtttctgtcagtgggcaccatgttgtatattctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aaaagagtgtcgaagaagttgaggtggtttctgtcagtgggcaccatgttgtatattctg 255
Query: 601 taactacgccatttgttgtagttgttacagtagataatacagctgttgtgctatgtgttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 taactacgccatttgttgtagttgttacagtagataatacagctgttgtgctatgtgttg 195
Query: 661 tttcaattcccgatgaatcggtagttgtgatcggaatgactgatgttgta 710
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tttcaattcccgatgaatcggtagttgtgatcggaatgactgatgttgta 145
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6863
Number of Sequences: 1807
Number of extensions: 6863
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)